GenomeRunner web

Command line module FAQ

* The web interface allows filtering genomic features by score and strand. Can I do that in command line?

Yes. Note that the regulatory datasets with score and/or strand are filtered and placed into the grsnp_db_##_### subfolders (see Database structure), where ## is the % threshold and ### is the "plus/minus" strand indicator (see Filtering). Simply provide paths to these filtered datasets in the gfs.txt file.