Fall 2016

GEO, Gene Expression Omnibus

GEO Structure

  • Platform (GPL) - Annotation the technology and the features

  • Sample (GSM) - Submitter-supplied sample data

  • Series (GSE) - A collection of biologically- and statistically- comparable samples processed using the same platform

  • DataSets (GDS) - Data collections assembled by GEO staff.

GEO Structure

Platform page

Sample page

Sample data preview

Field description, truncated view, total rows

Series page

Search DataSet or Gene profile

GEO DataSet analysis

ArrayExpress